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1. |
Genometric Analysis Simulation Program (GASP)
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Program to generate samples of family data based on user specified genetic models.
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Haplo
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Fortran 77 code by Daniel E. Weeks and Kenneth Lange for haplotyping with computation of conditional probabilities.
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LIPED
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Fortran program by Jurg Ott to carry out genetic linkage analysis -- estimate the recombination fraction, by calculating pedigree likelihoods for various assumed values of the recombination fraction. Only two loci can be handled at a time, for example, a disease locus and a marker locus.
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Naccess
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Fortran program to calculate the accessible area of a molecule from a PDB (Protein Data Bank) format file. It can calculate the atomic and residue accessiblities for both proteins and nucleic acids. Free for academics.
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